Index

Symbols

--autocrop cov3d-lr-finder command line option cov3d-show-batch command line option cov3d-train command line option cov3d-tune command line option cov3d-validate command line option --batch-size cov3d-lr-finder command line option cov3d-show-batch command line option cov3d-train command line option cov3d-tune command line option cov3d-validate command line option --brightness cov3d-lr-finder command line option cov3d-show-batch command line option cov3d-train command line option cov3d-tune command line option cov3d-validate command line option --contrast cov3d-lr-finder command line option cov3d-show-batch command line option cov3d-train command line option cov3d-tune command line option cov3d-validate command line option --cov3d-trained cov3d-lr-finder command line option cov3d-train command line option cov3d-tune command line option --covid-txt cov3d-infer command line option --critical-txt cov3d-infer command line option --depth cov3d-lr-finder command line option cov3d-show-batch command line option cov3d-train command line option cov3d-tune command line option cov3d-validate command line option --directory cov3d-infer command line option cov3d-lr-finder command line option cov3d-show-batch command line option cov3d-train command line option cov3d-tune command line option cov3d-validate command line option --distortion cov3d-lr-finder command line option cov3d-show-batch command line option cov3d-train command line option cov3d-tune command line option cov3d-validate command line option --distributed cov3d-train command line option cov3d-tune command line option --dropout cov3d-lr-finder command line option cov3d-train command line option cov3d-tune command line option --emd-weight cov3d-lr-finder command line option cov3d-train command line option cov3d-tune command line option --end-lr cov3d-lr-finder command line option --engine cov3d-tune command line option --epochs cov3d-train command line option cov3d-tune command line option --even-stride cov3d-lr-finder command line option cov3d-train command line option cov3d-tune command line option --final-bias cov3d-lr-finder command line option cov3d-train command line option cov3d-tune command line option --fine-tune cov3d-lr-finder command line option cov3d-train command line option cov3d-tune command line option --flatten cov3d-lr-finder command line option cov3d-train command line option cov3d-tune command line option --flip cov3d-lr-finder command line option cov3d-show-batch command line option cov3d-train command line option cov3d-tune command line option cov3d-validate command line option --fp16 cov3d-lr-finder command line option cov3d-train command line option cov3d-tune command line option --freeze-epochs cov3d-train command line option cov3d-tune command line option --gpu cov3d-infer command line option cov3d-validate command line option --height cov3d-lr-finder command line option cov3d-show-batch command line option cov3d-train command line option cov3d-tune command line option cov3d-validate command line option --id cov3d-tune command line option --install-completion cov3d command line option --iterations cov3d-lr-finder command line option --learning-rate cov3d-train command line option cov3d-tune command line option --max-pool cov3d-lr-finder command line option cov3d-train command line option cov3d-tune command line option --max-scans cov3d-lr-finder command line option cov3d-show-batch command line option cov3d-train command line option cov3d-tune command line option cov3d-validate command line option --mc-dropout cov3d-infer command line option --mc-samples cov3d-infer command line option --method cov3d-tune command line option --mild-txt cov3d-infer command line option --min-iter cov3d-tune command line option --mlflow cov3d-train command line option cov3d-tune command line option --model-name cov3d-lr-finder command line option cov3d-train command line option cov3d-tune command line option --moderate-txt cov3d-infer command line option --mse cov3d-lr-finder command line option cov3d-train command line option cov3d-tune command line option --name cov3d-tune command line option --neighbour-smoothing cov3d-lr-finder command line option cov3d-train command line option cov3d-tune command line option --no-autocrop cov3d-lr-finder command line option cov3d-show-batch command line option cov3d-train command line option cov3d-tune command line option cov3d-validate command line option --no-distortion cov3d-lr-finder command line option cov3d-show-batch command line option cov3d-train command line option cov3d-tune command line option cov3d-validate command line option --no-distributed cov3d-train command line option cov3d-tune command line option --no-even-stride cov3d-lr-finder command line option cov3d-train command line option cov3d-tune command line option --no-final-bias cov3d-lr-finder command line option cov3d-train command line option cov3d-tune command line option --no-fine-tune cov3d-lr-finder command line option cov3d-train command line option cov3d-tune command line option --no-flatten cov3d-lr-finder command line option cov3d-train command line option cov3d-tune command line option --no-flip cov3d-lr-finder command line option cov3d-show-batch command line option cov3d-train command line option cov3d-tune command line option cov3d-validate command line option --no-fp16 cov3d-lr-finder command line option cov3d-train command line option cov3d-tune command line option

--no-gpu cov3d-infer command line option cov3d-validate command line option --no-max-pool cov3d-lr-finder command line option cov3d-train command line option cov3d-tune command line option --no-mc-dropout cov3d-infer command line option --no-mlflow cov3d-train command line option cov3d-tune command line option --no-mse cov3d-lr-finder command line option cov3d-train command line option cov3d-tune command line option --no-neighbour-smoothing cov3d-lr-finder command line option cov3d-train command line option cov3d-tune command line option --no-normalize cov3d-lr-finder command line option cov3d-show-batch command line option cov3d-train command line option cov3d-tune command line option cov3d-validate command line option --no-positional-encoding cov3d-lr-finder command line option cov3d-train command line option cov3d-tune command line option --no-pretrained cov3d-lr-finder command line option cov3d-train command line option cov3d-tune command line option --no-reload cov3d-infer command line option cov3d-validate command line option --no-severity-everything cov3d-lr-finder command line option cov3d-train command line option cov3d-tune command line option --no-severity-regression cov3d-lr-finder command line option cov3d-train command line option cov3d-tune command line option --no-wandb cov3d-train command line option cov3d-tune command line option --noncovid-txt cov3d-infer command line option --normalize cov3d-lr-finder command line option cov3d-show-batch command line option cov3d-train command line option cov3d-tune command line option cov3d-validate command line option --notes cov3d-train command line option cov3d-tune command line option --output-csv cov3d-infer command line option --output-dir cov3d-lr-finder command line option cov3d-train command line option cov3d-tune command line option --output-mc cov3d-infer command line option --output-path cov3d-show-batch command line option --penultimate cov3d-lr-finder command line option cov3d-train command line option cov3d-tune command line option --plot-filename cov3d-lr-finder command line option --positional-encoding cov3d-lr-finder command line option cov3d-train command line option cov3d-tune command line option --presence-smoothing cov3d-lr-finder command line option cov3d-train command line option cov3d-tune command line option --pretrained cov3d-infer command line option cov3d-lr-finder command line option cov3d-train command line option cov3d-tune command line option cov3d-validate command line option --project-name cov3d-train command line option cov3d-tune command line option --reload cov3d-infer command line option cov3d-validate command line option --run-id cov3d-train command line option cov3d-tune command line option --run-name cov3d-train command line option cov3d-tune command line option --runs cov3d-tune command line option --scan cov3d-infer command line option --scan-dir cov3d-infer command line option --seed cov3d-tune command line option --severe-txt cov3d-infer command line option --severity-everything cov3d-lr-finder command line option cov3d-train command line option cov3d-tune command line option --severity-factor cov3d-lr-finder command line option cov3d-show-batch command line option cov3d-train command line option cov3d-tune command line option cov3d-validate command line option --severity-regression cov3d-lr-finder command line option cov3d-train command line option cov3d-tune command line option --severity-smoothing cov3d-lr-finder command line option cov3d-train command line option cov3d-tune command line option --show-completion cov3d command line option --split cov3d-lr-finder command line option cov3d-show-batch command line option cov3d-train command line option cov3d-tune command line option cov3d-validate command line option --splits-csv cov3d-lr-finder command line option cov3d-show-batch command line option cov3d-train command line option cov3d-tune command line option cov3d-validate command line option --start-lr cov3d-lr-finder command line option --tag cov3d-train command line option cov3d-tune command line option --training-severity cov3d-lr-finder command line option cov3d-show-batch command line option cov3d-train command line option cov3d-tune command line option cov3d-validate command line option --validation-severity cov3d-lr-finder command line option cov3d-show-batch command line option cov3d-train command line option cov3d-tune command line option cov3d-validate command line option --version cov3d command line option --wandb cov3d-train command line option cov3d-tune command line option --wandb-dir cov3d-train command line option cov3d-tune command line option --wandb-entity cov3d-train command line option cov3d-tune command line option --wandb-group cov3d-train command line option cov3d-tune command line option --wandb-job-type cov3d-train command line option cov3d-tune command line option --wandb-mode cov3d-train command line option cov3d-tune command line option --weight-decay cov3d-lr-finder command line option cov3d-train command line option cov3d-tune command line option --width cov3d-lr-finder command line option cov3d-show-batch command line option cov3d-train command line option cov3d-tune command line option cov3d-validate command line option -v cov3d command line option

A

activation() (cov3d.apps.Cov3d method) (cov3d.apps.Cov3dSeverity method)

assert_initialized() (cov3d.apps.Cov3d method) (cov3d.apps.Cov3dSeverity method)

C

cache_dir() (cov3d.apps.Cov3d method) (cov3d.apps.Cov3dSeverity method) callbacks() (cov3d.apps.Cov3d method) (cov3d.apps.Cov3dSeverity method) cli() (cov3d.apps.Cov3d method) (cov3d.apps.Cov3dSeverity method) click() (cov3d.apps.Cov3d class method) (cov3d.apps.Cov3dSeverity class method) Cov3d (class in cov3d.apps) cov3d command line option --install-completion --show-completion --version -v cov3d-infer command line option --covid-txt --critical-txt --directory --gpu --mc-dropout --mc-samples --mild-txt --moderate-txt --no-gpu --no-mc-dropout --no-reload --noncovid-txt --output-csv --output-mc --pretrained --reload --scan --scan-dir --severe-txt cov3d-lr-finder command line option --autocrop --batch-size --brightness --contrast --cov3d-trained --depth --directory --distortion --dropout --emd-weight --end-lr --even-stride --final-bias --fine-tune --flatten --flip --fp16 --height --iterations --max-pool --max-scans --model-name --mse --neighbour-smoothing --no-autocrop --no-distortion --no-even-stride --no-final-bias --no-fine-tune --no-flatten --no-flip --no-fp16 --no-max-pool --no-mse --no-neighbour-smoothing --no-normalize --no-positional-encoding --no-pretrained --no-severity-everything --no-severity-regression --normalize --output-dir --penultimate --plot-filename --positional-encoding --presence-smoothing --pretrained --severity-everything --severity-factor --severity-regression --severity-smoothing --split --splits-csv --start-lr --training-severity --validation-severity --weight-decay --width cov3d-show-batch command line option --autocrop --batch-size --brightness --contrast --depth --directory --distortion --flip --height --max-scans --no-autocrop --no-distortion --no-flip --no-normalize --normalize --output-path --severity-factor --split --splits-csv --training-severity --validation-severity --width cov3d-train command line option --autocrop --batch-size --brightness --contrast --cov3d-trained --depth --directory --distortion --distributed --dropout --emd-weight --epochs --even-stride --final-bias --fine-tune --flatten --flip --fp16 --freeze-epochs --height --learning-rate --max-pool --max-scans --mlflow --model-name --mse --neighbour-smoothing --no-autocrop --no-distortion --no-distributed --no-even-stride --no-final-bias --no-fine-tune --no-flatten --no-flip --no-fp16 --no-max-pool --no-mlflow --no-mse --no-neighbour-smoothing --no-normalize --no-positional-encoding --no-pretrained --no-severity-everything --no-severity-regression --no-wandb --normalize --notes --output-dir --penultimate --positional-encoding --presence-smoothing --pretrained --project-name --run-id --run-name --severity-everything --severity-factor --severity-regression --severity-smoothing --split --splits-csv --tag --training-severity --validation-severity --wandb --wandb-dir --wandb-entity --wandb-group --wandb-job-type --wandb-mode --weight-decay --width

cov3d-tune command line option --autocrop --batch-size --brightness --contrast --cov3d-trained --depth --directory --distortion --distributed --dropout --emd-weight --engine --epochs --even-stride --final-bias --fine-tune --flatten --flip --fp16 --freeze-epochs --height --id --learning-rate --max-pool --max-scans --method --min-iter --mlflow --model-name --mse --name --neighbour-smoothing --no-autocrop --no-distortion --no-distributed --no-even-stride --no-final-bias --no-fine-tune --no-flatten --no-flip --no-fp16 --no-max-pool --no-mlflow --no-mse --no-neighbour-smoothing --no-normalize --no-positional-encoding --no-pretrained --no-severity-everything --no-severity-regression --no-wandb --normalize --notes --output-dir --penultimate --positional-encoding --presence-smoothing --pretrained --project-name --run-id --run-name --runs --seed --severity-everything --severity-factor --severity-regression --severity-smoothing --split --splits-csv --tag --training-severity --validation-severity --wandb --wandb-dir --wandb-entity --wandb-group --wandb-job-type --wandb-mode --weight-decay --width cov3d-validate command line option --autocrop --batch-size --brightness --contrast --depth --directory --distortion --flip --gpu --height --max-scans --no-autocrop --no-distortion --no-flip --no-gpu --no-normalize --no-reload --normalize --pretrained --reload --severity-factor --split --splits-csv --training-severity --validation-severity --width cov3d.apps module Cov3dSeverity (class in cov3d.apps)

D

dataloaders() (cov3d.apps.Cov3d method) (cov3d.apps.Cov3dSeverity method)

G

goal() (cov3d.apps.Cov3d method) (cov3d.apps.Cov3dSeverity method)

I

inference_only_click() (cov3d.apps.Cov3d class method) (cov3d.apps.Cov3dSeverity class method)

inference_only_main() (cov3d.apps.Cov3d class method) (cov3d.apps.Cov3dSeverity class method)

L

learner() (cov3d.apps.Cov3d method) (cov3d.apps.Cov3dSeverity method)

loss_func() (cov3d.apps.Cov3d method) (cov3d.apps.Cov3dSeverity method)

M

main() (cov3d.apps.Cov3d class method) (cov3d.apps.Cov3dSeverity class method) metrics() (cov3d.apps.Cov3d method) (cov3d.apps.Cov3dSeverity method) model() (cov3d.apps.Cov3d method) (cov3d.apps.Cov3dSeverity method)

module cov3d.apps monitor() (cov3d.apps.Cov3d method) (cov3d.apps.Cov3dSeverity method)

P

pretrained_local_path() (cov3d.apps.Cov3d method) (cov3d.apps.Cov3dSeverity method) pretrained_location() (cov3d.apps.Cov3d method) (cov3d.apps.Cov3dSeverity method)

project_name() (cov3d.apps.Cov3d method) (cov3d.apps.Cov3dSeverity method)

T

train() (cov3d.apps.Cov3d method) (cov3d.apps.Cov3dSeverity method)

V

version() (cov3d.apps.Cov3d method) (cov3d.apps.Cov3dSeverity method)