Coverage report: 100.00%

Files Functions Classes

coverage.py v7.6.1, created at 2024-12-02 04:29 +0000

File function statements missing excluded coverage
seqbank/__init__.py (no function) 2 0 0 100.00%
seqbank/dfam.py dfam_url 3 0 0 100.00%
seqbank/dfam.py add_dfam 3 0 0 100.00%
seqbank/dfam.py add_dfam.visitor_func 4 0 0 100.00%
seqbank/dfam.py download_dfam 19 0 0 100.00%
seqbank/dfam.py (no function) 10 0 0 100.00%
seqbank/exceptions.py (no function) 2 0 0 100.00%
seqbank/io.py open_path 7 0 0 100.00%
seqbank/io.py get_file_format 17 0 0 100.00%
seqbank/io.py seq_count 4 0 0 100.00%
seqbank/io.py download_file 6 0 0 100.00%
seqbank/io.py TemporaryDirectory.__init__ 8 0 0 100.00%
seqbank/io.py TemporaryDirectory.cleanup 4 0 0 100.00%
seqbank/io.py TemporaryDirectory.__enter__ 1 0 0 100.00%
seqbank/io.py (no function) 14 0 0 100.00%
seqbank/main.py add 3 0 0 100.00%
seqbank/main.py add_sequence_from_file 4 0 0 100.00%
seqbank/main.py url 3 0 0 100.00%
seqbank/main.py delete 4 0 0 100.00%
seqbank/main.py refseq 2 0 0 100.00%
seqbank/main.py dfam 3 0 0 100.00%
seqbank/main.py ls 2 0 0 100.00%
seqbank/main.py count 2 0 0 100.00%
seqbank/main.py cp 4 0 0 100.00%
seqbank/main.py export 3 0 0 100.00%
seqbank/main.py histogram 8 0 0 100.00%
seqbank/main.py (no function) 31 0 0 100.00%
seqbank/refseq.py get_refseq_filenames 7 0 0 100.00%
seqbank/refseq.py get_refseq_urls 2 0 0 100.00%
seqbank/refseq.py (no function) 5 0 0 100.00%
seqbank/seqbank.py SeqBank.__attrs_post_init__ 3 0 0 100.00%
seqbank/seqbank.py SeqBank.key 1 0 0 100.00%
seqbank/seqbank.py SeqBank.key_url 1 0 0 100.00%
seqbank/seqbank.py SeqBank.close 4 0 0 100.00%
seqbank/seqbank.py SeqBank.file 8 0 0 100.00%
seqbank/seqbank.py SeqBank.__len__ 4 0 0 100.00%
seqbank/seqbank.py SeqBank.__getitem__ 6 0 0 100.00%
seqbank/seqbank.py SeqBank.items 2 0 0 100.00%
seqbank/seqbank.py SeqBank.__contains__ 4 0 0 100.00%
seqbank/seqbank.py SeqBank.delete 4 0 0 100.00%
seqbank/seqbank.py SeqBank.add 8 0 0 100.00%
seqbank/seqbank.py SeqBank.add_file 23 0 0 100.00%
seqbank/seqbank.py SeqBank.add_sequence_from_file 12 0 0 100.00%
seqbank/seqbank.py SeqBank.add_sequence_from_file.check_total 2 0 0 100.00%
seqbank/seqbank.py SeqBank.seen_url 1 0 0 100.00%
seqbank/seqbank.py SeqBank.save_seen_url 2 0 0 100.00%
seqbank/seqbank.py SeqBank.add_url 13 0 0 100.00%
seqbank/seqbank.py SeqBank.get_accessions 7 0 0 100.00%
seqbank/seqbank.py SeqBank.missing 5 0 0 100.00%
seqbank/seqbank.py SeqBank.add_urls 11 0 0 100.00%
seqbank/seqbank.py SeqBank.ls 2 0 0 100.00%
seqbank/seqbank.py SeqBank.add_files 6 0 0 100.00%
seqbank/seqbank.py SeqBank.copy 2 0 0 100.00%
seqbank/seqbank.py SeqBank.numpy 1 0 0 100.00%
seqbank/seqbank.py SeqBank.string 2 0 0 100.00%
seqbank/seqbank.py SeqBank.record 2 0 0 100.00%
seqbank/seqbank.py SeqBank.export 7 0 0 100.00%
seqbank/seqbank.py SeqBank.lengths_dict 5 0 0 100.00%
seqbank/seqbank.py SeqBank.histogram 10 0 0 100.00%
seqbank/seqbank.py (no function) 53 0 0 100.00%
seqbank/transform.py seq_to_bytes 6 0 0 100.00%
seqbank/transform.py seq_to_numpy 2 0 0 100.00%
seqbank/transform.py bytes_to_str 1 0 0 100.00%
seqbank/transform.py (no function) 13 0 0 100.00%
seqbank/utils.py parse_filter 5 0 0 100.00%
seqbank/utils.py format_fig 6 0 0 100.00%
seqbank/utils.py (no function) 4 0 0 100.00%
Total   435 0 0 100.00%

No items found using the specified filter.